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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1488
candidate regulatory elements
1238
target gene predictions
964
histone modifications
805
binding sites
791
accessible chromatin
102
variant allelic effects
36
chromatin state
13
caQTL
7
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
Date released
2290
February, 2021
1497
September, 2022
312
November, 2021
272
February, 2024
270
June, 2020
270
May, 2021
115
May, 2020
99
October, 2022
49
January, 2020
41
March, 2020
41
November, 2022
36
January, 2021
35
August, 2021
31
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
5
January, 2022
5
September, 2023
3
October, 2019
3
September, 2018
2
November, 2020
1
August, 2020
1
August, 2022
Available data
5455
bed bed3+
779
bed bed9
571
tsv
453
bigWig
36
bigBed bed9
34
bed bed9+
21
csv
21
txt
2
bigBed narrowPeak
1
bam
Organism
5409
Homo sapiens
Biosample type
2074
cell line
1556
tissue
1473
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5083
AMP
312
ENCODE
40
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5447
hg19
733
GRCh38
1
hg18
organ_slims!
kidney
pancreas
BIOSAMPLE
TYPE
5455 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 746 more…
tissue
heart
37
20
1
1
5
2
stomach
40
21
1
3
brain
29
16
3
1
2
1
muscle of arm
33
16
1
1
lung
33
17
+ See 190 more…
primary cell
monocyte
2
86
1
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
2
15
2
2
1
+ See 300 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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