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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1503
candidate regulatory elements
1276
target gene predictions
970
histone modifications
862
chromatin state
861
accessible chromatin
810
binding sites
480
gene expression
165
eQTL
124
variant allelic effects
111
differential activity
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
272
June, 2020
219
November, 2021
51
January, 2020
51
May, 2020
49
February, 2024
44
November, 2022
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
15
August, 2021
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
852
bed bed3+
493
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
816
Homo sapiens
Biosample type
461
primary cell
175
tissue
157
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
594
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
854
hg19
365
GRCh38
organ_slims!
kidney
lymphoid tissue
BIOSAMPLE
TYPE
861 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 199 more…
tissue
retina
23
pigmented layer of retina
20
islet of Langerhans
6
heart
5
pancreas
5
+ See 83 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 142 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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