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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1447
candidate regulatory elements
1243
target gene predictions
957
histone modifications
824
accessible chromatin
786
binding sites
105
variant allelic effects
39
chromatin state
10
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2251
February, 2021
1463
September, 2022
327
November, 2021
281
February, 2024
280
May, 2021
265
June, 2020
113
May, 2020
97
October, 2022
56
January, 2021
48
January, 2020
42
March, 2020
41
November, 2022
36
August, 2021
33
August, 2017
27
February, 2023
17
April, 2020
15
May, 2022
10
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5431
bed bed3+
753
bed bed9
621
tsv
488
bigWig
34
bed bed9+
30
bigBed bed9
24
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5385
Homo sapiens
Biosample type
2045
cell line
1567
tissue
1467
primary cell
346
in vitro differentiated cells
4
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5026
AMP
327
ENCODE
60
T1D
17
LungMap
1
ITG
Genome assembly (visualization)
5426
hg19
746
GRCh38
1
hg18
organ_slims!
kidney
prostate gland
blood vessel
BIOSAMPLE
TYPE
5431 results
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table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 740 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
lung
33
17
+ See 194 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 295 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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