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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
accessible chromatin
113
target gene predictions
84
candidate regulatory elements
82
gene expression
44
chromatin state
binding sites
38
differential activity
34
variant allelic effects
27
histone modifications
2
caQTL
1
eQTL
Date released
125
November, 2021
124
September, 2022
82
February, 2021
69
February, 2024
38
March, 2023
34
May, 2021
20
January, 2021
20
September, 2023
18
June, 2020
15
November, 2022
12
February, 2023
8
May, 2020
7
April, 2020
7
August, 2021
6
August, 2018
6
January, 2020
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
February, 2020
1
July, 2020
1
November, 2019
1
October, 2022
Available data
449
bed bed3+
159
bigWig
106
tsv
41
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
613
Homo sapiens
Biosample type
503
primary cell
54
tissue
33
cell line
23
in vitro differentiated cells
Organ
906
epithelium
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
439
AMP
125
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
492
hg19
209
GRCh38
organ_slims!
kidney
ureter
annotation_type!
binding sites
BIOSAMPLE
TYPE
613 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
15
7
9
2
1
2
1
hepatocyte
8
3
1
13
1
2
4
foreskin keratinocyte
4
11
4
endothelial cell of umbilical vein
2
4
6
5
1
pancreatic beta cell
8
3
3
3
1
+ See 86 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 9 more…
cell line
EndoC_BH1
8
1
8
3
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
epithelial cell of prostate
1
1
dermis lymphatic vessel endothelial cell
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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