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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
candidate regulatory elements
225
accessible chromatin
209
target gene predictions
136
chromatin state
100
gene expression
50
binding sites
47
variant allelic effects
40
differential activity
37
histone modifications
15
Fine-mapped variants
14
eQTL
7
caQTL
Date released
364
September, 2022
222
February, 2021
136
November, 2021
91
February, 2024
42
May, 2021
38
March, 2023
26
June, 2020
26
March, 2020
20
January, 2021
20
May, 2020
20
September, 2023
18
January, 2020
16
February, 2023
15
November, 2022
11
February, 2020
9
August, 2021
9
October, 2022
8
October, 2019
7
April, 2020
6
August, 2017
6
August, 2018
5
March, 2024
5
May, 2022
4
January, 2022
4
November, 2019
3
May, 2019
1
July, 2020
Available data
833
bed bed3+
184
bigWig
139
tsv
130
bed bed9
14
bigBed narrowPeak
11
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
Organism
1132
Homo sapiens
Biosample type
598
primary cell
444
tissue
62
cell line
28
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
947
AMP
136
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
989
hg19
355
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1132 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
binding sites
variant allelic effects
differential activity
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
1
8
3
1
13
1
2
4
endothelial cell of umbilical vein
6
2
4
5
2
1
foreskin keratinocyte
11
4
4
pancreatic ductal cell
6
3
3
1
1
3
2
+ See 98 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
coronary artery
3
3
3
3
1
2
3
2
1
pigmented layer of retina
20
+ See 41 more…
cell line
EndoC_BH1
8
1
8
1
3
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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