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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
248
candidate regulatory elements
231
accessible chromatin
209
target gene predictions
145
chromatin state
107
gene expression
52
variant allelic effects
46
binding sites
38
differential activity
35
histone modifications
18
Fine-mapped variants
12
eQTL
4
caQTL
Date released
370
September, 2022
217
February, 2021
130
November, 2021
80
February, 2024
41
May, 2021
38
March, 2023
30
March, 2020
29
June, 2020
29
May, 2020
25
January, 2020
20
January, 2021
20
September, 2023
17
February, 2020
15
August, 2021
15
February, 2023
15
November, 2022
7
April, 2020
7
October, 2019
6
April, 2019
6
August, 2018
6
November, 2019
5
January, 2022
5
October, 2022
3
August, 2017
3
March, 2024
3
May, 2019
2
May, 2022
1
July, 2020
Available data
831
bed bed3+
192
bigWig
152
tsv
137
bed bed9
16
bigBed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
Organism
1145
Homo sapiens
Biosample type
557
primary cell
504
tissue
57
cell line
27
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
966
AMP
130
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
992
hg19
381
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1145 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
gene expression
variant allelic effects
binding sites
differential activity
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
1
8
3
1
13
2
1
4
endothelial cell of umbilical vein
6
2
4
5
1
2
foreskin keratinocyte
11
4
4
pancreatic ductal cell
6
3
3
1
1
3
2
+ See 94 more…
tissue
heart
37
5
20
21
3
2
1
1
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
heart left ventricle
11
3
7
8
1
2
1
1
tibial nerve
6
3
3
4
2
2
3
2
+ See 46 more…
cell line
EndoC_BH1
8
1
8
1
3
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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