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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
224
accessible chromatin
202
candidate regulatory elements
182
target gene predictions
111
chromatin state
104
gene expression
46
variant allelic effects
45
binding sites
44
differential activity
32
histone modifications
21
eQTL
14
Fine-mapped variants
2
caQTL
2
sQTL
2
variant to gene
Date released
302
September, 2022
193
February, 2021
126
November, 2021
79
February, 2024
51
March, 2023
45
May, 2021
27
June, 2020
23
March, 2020
23
May, 2020
22
January, 2021
20
September, 2023
17
January, 2020
15
August, 2021
15
November, 2022
12
February, 2023
9
February, 2020
7
April, 2020
7
August, 2018
6
August, 2017
6
January, 2022
6
October, 2019
5
October, 2022
4
November, 2019
3
March, 2024
2
May, 2019
2
May, 2022
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
Available data
740
bed bed3+
185
bigWig
149
tsv
104
bed bed9
15
bigBed narrowPeak
8
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
Organism
1031
Homo sapiens
Biosample type
549
primary cell
397
tissue
59
cell line
26
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
854
AMP
126
ENCODE
22
T1D
20
KPMP
7
LungMap
2
community
Genome assembly (visualization)
870
hg19
324
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
1031 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
variant allelic effects
binding sites
differential activity
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
8
1
3
1
13
2
1
4
endothelial cell of umbilical vein
2
6
4
5
1
2
foreskin keratinocyte
11
4
4
pancreatic ductal cell
6
3
3
1
1
3
2
+ See 93 more…
tissue
muscle of arm
1
33
16
16
1
muscle of leg
2
27
14
15
islet of Langerhans
6
1
3
11
1
2
1
13
2
2
2
tibial nerve
3
6
3
4
2
2
2
3
body of pancreas
8
5
4
2
1
1
3
+ See 37 more…
cell line
EndoC_BH1
8
1
8
1
3
GM23248
1
2
1
1
1
1
Panc1
2
2
1
keratinocyte
3
1
8988T
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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