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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
212
accessible chromatin
140
target gene predictions
116
candidate regulatory elements
103
gene expression
68
chromatin state
46
binding sites
44
differential activity
42
variant allelic effects
33
histone modifications
21
eQTL
11
Fine-mapped variants
4
caQTL
2
sQTL
2
variant to gene
Date released
179
September, 2022
145
February, 2021
126
November, 2021
79
February, 2024
51
March, 2023
44
May, 2021
23
June, 2020
22
January, 2021
20
March, 2020
20
September, 2023
18
May, 2020
15
August, 2021
15
February, 2023
15
November, 2022
14
January, 2020
7
April, 2020
7
August, 2018
7
January, 2022
6
August, 2017
6
February, 2020
6
October, 2019
6
October, 2022
4
November, 2019
2
March, 2024
2
May, 2022
1
April, 2019
1
January, 2018
1
July, 2020
1
June, 2021
1
May, 2019
Available data
600
bed bed3+
178
bigWig
143
tsv
61
bed bed9
15
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
Organism
844
Homo sapiens
Biosample type
559
primary cell
203
tissue
56
cell line
26
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
667
AMP
126
ENCODE
22
T1D
20
KPMP
7
LungMap
2
community
Genome assembly (visualization)
681
hg19
272
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
844 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
sQTL
variant to gene
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
8
3
1
13
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 94 more…
tissue
islet of Langerhans
6
1
11
3
2
1
1
13
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
coronary artery
3
3
3
1
3
2
2
3
1
pigmented layer of retina
20
+ See 18 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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