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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
192
accessible chromatin
125
target gene predictions
107
candidate regulatory elements
83
gene expression
55
chromatin state
47
binding sites
38
differential activity
34
variant allelic effects
33
histone modifications
2
caQTL
2
eQTL
Date released
157
September, 2022
137
February, 2021
125
November, 2021
75
February, 2024
38
March, 2023
35
May, 2021
22
June, 2020
20
January, 2021
20
September, 2023
15
November, 2022
12
February, 2023
8
May, 2020
7
April, 2020
7
August, 2021
6
August, 2018
6
January, 2020
6
March, 2020
5
October, 2019
5
October, 2022
3
August, 2017
3
March, 2024
2
May, 2022
1
February, 2020
1
January, 2022
1
July, 2020
1
November, 2019
Available data
541
bed bed3+
159
bigWig
107
tsv
52
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
txt
3
xls
2
bigBed bed9
Organism
718
Homo sapiens
Biosample type
532
primary cell
91
cell line
69
tissue
26
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
544
AMP
125
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
595
hg19
227
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
718 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
15
7
9
2
2
1
2
1
hepatocyte
8
3
1
13
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 86 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 14 more…
tissue
pigmented layer of retina
20
prostate gland
1
2
4
2
2
2
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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