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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
195
accessible chromatin
128
target gene predictions
113
candidate regulatory elements
85
gene expression
59
chromatin state
47
binding sites
38
differential activity
36
variant allelic effects
33
histone modifications
4
eQTL
3
Fine-mapped variants
2
caQTL
Date released
166
September, 2022
140
February, 2021
125
November, 2021
75
February, 2024
38
March, 2023
35
May, 2021
23
June, 2020
20
January, 2021
20
September, 2023
15
November, 2022
12
February, 2023
11
May, 2020
9
March, 2020
7
April, 2020
7
August, 2021
7
January, 2020
6
August, 2018
5
October, 2019
5
October, 2022
4
February, 2020
3
August, 2017
3
March, 2024
2
January, 2022
2
May, 2022
2
November, 2019
1
July, 2020
Available data
555
bed bed3+
161
bigWig
113
tsv
56
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
bigBed bed9
3
txt
3
xls
Organism
743
Homo sapiens
Biosample type
532
primary cell
94
tissue
91
cell line
26
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
569
AMP
125
ENCODE
20
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
617
hg19
238
GRCh38
organ_slims!
kidney
BIOSAMPLE
TYPE
743 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
binding sites
differential activity
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
15
7
9
2
2
1
1
2
hepatocyte
8
3
1
13
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
1
3
1
2
+ See 86 more…
tissue
tibial nerve
3
3
6
2
4
2
2
3
pigmented layer of retina
20
prostate gland
1
2
4
2
2
2
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 14 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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