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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
87
target gene predictions
67
binding sites
59
chromatin state
47
accessible chromatin
33
histone modifications
24
gene expression
14
variant allelic effects
10
differential activity
9
Fine-mapped variants
8
eQTL
3
caQTL
1
pQTL
Date released
147
September, 2022
123
February, 2021
45
February, 2024
23
October, 2022
18
June, 2020
15
January, 2020
15
September, 2023
14
May, 2020
12
March, 2020
7
May, 2021
6
November, 2021
5
February, 2020
4
August, 2021
4
February, 2023
4
March, 2023
3
April, 2020
3
August, 2017
3
January, 2022
3
November, 2019
2
October, 2019
1
March, 2024
1
May, 2019
Available data
350
bed bed3+
56
bed bed9
44
tsv
30
bigWig
8
bigBed bed9
2
txt
Organism
458
Homo sapiens
Biosample type
216
cell line
153
primary cell
87
tissue
2
in vitro differentiated cells
Organ
949
epithelium
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
434
AMP
15
KPMP
6
ENCODE
3
LungMap
Genome assembly (visualization)
417
hg19
138
GRCh38
organ_slims!
kidney
pancreas
BIOSAMPLE
TYPE
458 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
variant allelic effects
differential activity
Fine-mapped variants
eQTL
caQTL
pQTL
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 30 more…
primary cell
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
2
1
1
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 24 more…
tissue
coronary artery
3
3
3
3
1
2
3
2
1
tibial artery
3
2
3
3
1
2
3
2
ascending aorta
4
2
3
1
1
1
3
1
aorta
4
4
4
1
thoracic aorta
4
2
3
1
1
+ See 6 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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