Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
809
chromatin state
801
target gene predictions
800
candidate regulatory elements
6
accessible chromatin
6
histone modifications
Date released
2544
February, 2021
2413
September, 2022
384
May, 2021
375
February, 2024
327
November, 2021
286
September, 2023
282
June, 2020
155
May, 2020
128
August, 2021
127
March, 2020
104
January, 2022
100
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
32
August, 2017
32
February, 2023
28
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
1613
bed bed3+
809
bed bed9
9
bigBed bed9
6
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
2422
Homo sapiens
Biosample type
1300
tissue
530
cell line
487
primary cell
105
in vitro differentiated cells
Organ
226
kidney
210
lung
206
musculature of body
184
brain
164
intestine
151
epithelium
140
limb
120
connective tissue
109
heart
102
skin of body
99
extraembryonic component
large intestine
81
embryo
76
vasculature
75
bodily fluid
69
blood
69
stomach
61
blood vessel
57
small intestine
48
placenta
46
liver
44
pancreas
42
adrenal gland
42
bone element
42
mammary gland
39
prostate gland
39
ureter
33
thymus
30
penis
27
eye
24
adipose tissue
24
gonad
24
lymph node
24
spinal cord
22
artery
21
esophagus
18
spleen
15
lymphoid tissue
12
mouth
12
ovary
12
testis
12
thyroid gland
12
uterus
9
nerve
9
skeleton
6
breast
6
bronchus
6
lymphatic vessel
6
tongue
6
urinary bladder
6
vagina
6
vein
3
bone marrow
3
nose
Project
2422
AMP
Genome assembly (visualization)
2422
hg19
815
GRCh38
organ_slims!
large intestine
BIOSAMPLE
TYPE
2422 results
search-icon
table-tab-icon
Clear Filters
chromatin state
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
tissue
heart
19
19
19
stomach
19
19
19
brain
16
16
16
lung
16
16
16
muscle of arm
16
16
16
+ See 98 more…
cell line
A549
18
18
18
K562
6
6
6
MCF-7
5
5
5
HeLa-S3
3
3
3
endometrium adenocarcinoma
3
3
3
+ See 133 more…
primary cell
common myeloid progenitor, CD34-positive
13
13
13
CD4-positive, alpha-beta memory T cell
9
9
9
B cell
8
8
8
CD8-positive, alpha-beta memory T cell
7
7
7
mononuclear cell
6
6
6
+ See 75 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
10
10
neural progenitor cell
4
4
4
adipocyte
2
2
2
endodermal cell
2
2
2
mesenchymal stem cell
2
2
2
+ See 14 more…
See all biosamples
Download