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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
gene expression
41
accessible chromatin
27
target gene predictions
25
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
44
September, 2022
38
March, 2023
31
February, 2021
31
May, 2021
23
February, 2024
9
March, 2020
8
August, 2021
6
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
Available data
118
bed bed3+
67
tsv
33
bigWig
13
bed bed9
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
224
Homo sapiens
Biosample type
112
tissue
77
primary cell
32
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
224
AMP
18
ENCODE
18
T1D
2
community
Genome assembly (visualization)
145
hg19
41
GRCh38
organ_slims!
large intestine
connective tissue
BIOSAMPLE
TYPE
224 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
1
2
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 5 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
2
1
pancreatic beta cell
3
4
1
3
1
pancreatic alpha cell
3
3
1
3
1
pancreatic acinar cell
3
2
1
3
1
pancreatic delta cell
3
2
1
3
1
+ See 7 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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