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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1577
candidate regulatory elements
1169
target gene predictions
975
histone modifications
894
chromatin state
815
binding sites
623
accessible chromatin
507
gene expression
161
eQTL
131
variant allelic effects
65
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
59
January, 2020
54
May, 2020
48
February, 2024
44
November, 2022
30
August, 2021
26
May, 2021
25
February, 2023
14
May, 2022
10
November, 2019
9
October, 2019
6
September, 2022
5
February, 2021
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
613
bed bed3+
245
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
578
Homo sapiens
Biosample type
214
primary cell
178
tissue
162
cell line
69
in vitro differentiated cells
Organ
117
epithelium
55
eye
52
connective tissue
47
kidney
44
pancreas
42
brain
28
vasculature
21
blood vessel
20
heart
limb
20
liver
19
musculature of body
13
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
1
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
623
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
615
hg19
155
GRCh38
organ_slims!
limb
BIOSAMPLE
TYPE
623 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
hepatocyte
7
osteoblast
5
endothelial cell
4
endothelial cell of hepatic sinusoid
4
+ See 120 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 81 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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