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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1367
candidate regulatory elements
1165
target gene predictions
877
histone modifications
806
accessible chromatin
768
binding sites
109
variant allelic effects
35
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2119
February, 2021
1376
September, 2022
324
November, 2021
291
February, 2024
256
May, 2021
255
June, 2020
120
May, 2020
97
October, 2022
57
January, 2020
56
January, 2021
36
March, 2020
31
February, 2023
29
August, 2017
29
August, 2021
26
November, 2022
16
April, 2020
15
May, 2022
9
November, 2019
7
October, 2019
3
September, 2018
2
January, 2022
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
1
September, 2023
Available data
5162
bed bed3+
807
tsv
709
bed bed9
511
bigWig
108
txt
34
bed bed9+
31
bigBed bed9
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5116
Homo sapiens
Biosample type
2046
cell line
1564
primary cell
1546
tissue
in vitro differentiated cells
4
stem cell
Organ
530
epithelium
308
kidney
306
brain
286
connective tissue
279
musculature of body
lung
228
intestine
190
bodily fluid
181
blood
limb
173
heart
161
vasculature
159
pancreas
156
embryo
156
skin of body
137
large intestine
123
blood vessel
108
extraembryonic component
98
liver
93
stomach
92
eye
76
uterus
70
bone element
70
mammary gland
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
51
ureter
48
adipose tissue
48
penis
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
nerve
13
mouth
12
lymphatic vessel
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
Project
4761
AMP
324
ENCODE
60
T1D
16
LungMap
1
ITG
Genome assembly (visualization)
5154
hg19
747
GRCh38
1
hg18
organ_slims!
limb
lung
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
5162 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 751 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 322 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
small intestine
29
17
1
+ See 192 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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