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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1224
target gene predictions
963
histone modifications
871
accessible chromatin
802
binding sites
116
variant allelic effects
39
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1539
February, 2021
773
September, 2022
331
November, 2021
277
May, 2021
272
June, 2020
240
February, 2024
127
May, 2020
100
October, 2022
60
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
33
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4050
bed bed3+
873
tsv
792
bed bed9
530
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4004
Homo sapiens
Biosample type
1709
cell line
1255
primary cell
822
tissue
259
in vitro differentiated cells
3
stem cell
Organ
447
epithelium
250
connective tissue
198
brain
150
kidney
143
bodily fluid
138
blood
135
musculature of body
135
pancreas
embryo
115
intestine
113
vasculature
108
lung
103
heart
90
skin of body
84
blood vessel
limb
80
eye
78
liver
68
large intestine
67
uterus
53
extraembryonic component
45
bone element
45
mammary gland
42
stomach
36
artery
36
prostate gland
33
lymph node
30
adipose tissue
29
adrenal gland
27
placenta
27
small intestine
26
penis
20
gonad
20
ureter
18
thymus
16
esophagus
13
spinal cord
11
pituitary gland
11
skeleton
11
spleen
11
vein
10
bronchus
10
lymphatic vessel
10
testis
9
bone marrow
9
lymphoid tissue
9
ovary
9
thyroid gland
8
nerve
5
mouth
5
trachea
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
Project
3639
AMP
331
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4042
hg19
733
GRCh38
1
hg18
organ_slims!
limb
embryo
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
4050 results
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Clear Filters
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
55
1
K562
23
1
1
2
1
A549
19
1
1
2
breast cancer cell
11
9
HFFc6
19
+ See 717 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
5
30
4
endothelial cell
7
1
15
2
2
2
1
fibroblast
4
16
1
6
pericyte cell
10
10
+ See 317 more…
tissue
heart
20
1
5
1
2
kidney
14
2
10
1
1
1
retina
3
1
23
1
1
stomach
21
1
3
brain
16
3
2
1
1
+ See 183 more…
in vitro differentiated cells
neural progenitor cell
5
14
10
adipocyte
6
1
4
1
4
hematopoietic multipotent progenitor cell
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
5
1
+ See 90 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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