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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1491
candidate regulatory elements
1207
target gene predictions
960
histone modifications
868
accessible chromatin
799
binding sites
116
variant allelic effects
39
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2280
February, 2021
1500
September, 2022
330
November, 2021
276
May, 2021
270
June, 2020
242
February, 2024
127
May, 2020
99
October, 2022
60
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
33
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
11
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5515
bed bed3+
873
tsv
776
bed bed9
529
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5469
Homo sapiens
Biosample type
2008
cell line
1609
tissue
1568
primary cell
325
in vitro differentiated cells
3
stem cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
embryo
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5105
AMP
330
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5507
hg19
732
GRCh38
1
hg18
organ_slims!
limb
embryo
placenta
BIOSAMPLE
TYPE
5515 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
breast cancer cell
11
9
+ See 739 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
brain
29
16
3
2
1
1
lung
33
17
+ See 189 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 322 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 97 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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