Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
965
histone modifications
828
accessible chromatin
809
binding sites
782
candidate regulatory elements
677
gene expression
520
target gene predictions
167
differential activity
163
eQTL
130
variant allelic effects
107
chromatin state
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2515
February, 2021
September, 2022
386
May, 2021
377
February, 2024
329
November, 2021
286
September, 2023
277
June, 2020
143
May, 2020
128
August, 2021
119
March, 2020
104
January, 2022
99
October, 2022
80
January, 2020
70
March, 2023
56
February, 2020
56
January, 2021
49
May, 2022
35
August, 2017
29
March, 2024
22
November, 2022
19
April, 2020
14
October, 2019
12
November, 2019
9
August, 2018
8
April, 2019
8
February, 2023
7
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4082
bed bed3+
879
tsv
492
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
32
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5202
Homo sapiens
Biosample type
1967
primary cell
1799
cell line
1119
tissue
359
in vitro differentiated cells
4
stem cell
Organ
798
epithelium
427
kidney
338
connective tissue
286
brain
233
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
limb
102
skin of body
101
lung
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4547
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
4274
hg19
993
GRCh38
4
hg18
organ_slims!
limb
eye
month_released!
September, 2022
BIOSAMPLE
TYPE
5250 results
search-icon
table-tab-icon
Clear Filters
histone modifications
accessible chromatin
binding sites
candidate regulatory elements
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 433 more…
cell line
HeLa-S3
1
2
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
2
1
17
1
breast cancer cell
11
9
+ See 742 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
1
15
7
1
1
2
heart
1
5
1
18
3
1
2
2
stomach
1
3
21
1
2
1
liver
2
4
1
6
1
3
1
7
2
1
+ See 232 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
1
2
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
1
9
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download