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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1577
candidate regulatory elements
1308
target gene predictions
973
histone modifications
894
chromatin state
892
accessible chromatin
813
binding sites
678
gene expression
167
differential activity
166
eQTL
132
variant allelic effects
65
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
282
June, 2020
222
November, 2021
59
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
10
November, 2019
9
October, 2019
6
September, 2022
5
February, 2021
4
January, 2022
3
September, 2018
2
March, 2023
2
November, 2020
1
August, 2020
1
August, 2022
1
June, 2021
Available data
884
bed bed3+
514
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
tsv
Organism
851
Homo sapiens
Biosample type
483
primary cell
182
tissue
162
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
67
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
trachea
1
urinary bladder
Project
626
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
886
hg19
378
GRCh38
organ_slims!
limb
trachea
BIOSAMPLE
TYPE
896 results
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Clear Filters
accessible chromatin
variant to gene
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 216 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
2
heart
5
+ See 82 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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