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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1609
candidate regulatory elements
1311
target gene predictions
957
histone modifications
899
chromatin state
869
accessible chromatin
794
binding sites
639
gene expression
155
eQTL
154
differential activity
127
variant allelic effects
62
Fine-mapped variants
9
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
280
June, 2020
217
November, 2021
58
January, 2020
53
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
17
April, 2020
13
May, 2022
9
February, 2021
9
October, 2019
8
November, 2019
4
January, 2022
4
September, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
859
bed bed3+
498
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
824
Homo sapiens
Biosample type
456
primary cell
185
tissue
159
cell line
69
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
36
vasculature
27
musculature of body
blood vessel
26
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
606
AMP
217
ENCODE
29
T1D
17
LungMap
Genome assembly (visualization)
861
hg19
362
GRCh38
organ_slims!
liver
blood vessel
BIOSAMPLE
TYPE
869 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 206 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 90 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 145 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 30 more…
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