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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1598
candidate regulatory elements
1305
target gene predictions
955
histone modifications
894
chromatin state
859
accessible chromatin
789
binding sites
628
gene expression
155
eQTL
148
differential activity
121
variant allelic effects
62
Fine-mapped variants
9
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
278
June, 2020
215
November, 2021
53
January, 2020
53
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
24
February, 2023
16
April, 2020
13
May, 2022
9
February, 2021
9
October, 2019
8
November, 2019
4
January, 2022
4
September, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
849
bed bed3+
490
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
814
Homo sapiens
Biosample type
448
primary cell
185
tissue
158
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
vasculature
27
musculature of body
26
blood vessel
26
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
599
AMP
215
ENCODE
29
T1D
16
LungMap
Genome assembly (visualization)
851
hg19
355
GRCh38
organ_slims!
liver
vasculature
BIOSAMPLE
TYPE
859 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 202 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 90 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 144 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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