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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1511
candidate regulatory elements
1219
target gene predictions
949
histone modifications
chromatin state
803
accessible chromatin
793
binding sites
608
gene expression
145
eQTL
130
differential activity
122
variant allelic effects
66
Fine-mapped variants
12
caQTL
5
hQTL
3
meQTL
3
other
3
pQTL
3
sQTL
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
2462
February, 2021
1506
September, 2022
342
May, 2021
313
February, 2024
291
November, 2021
286
September, 2023
270
June, 2020
143
May, 2020
110
August, 2021
107
March, 2020
99
October, 2022
98
January, 2022
76
January, 2020
60
February, 2020
44
November, 2022
36
January, 2021
31
February, 2023
27
March, 2024
19
April, 2020
19
March, 2023
13
May, 2022
10
November, 2019
3
November, 2020
3
October, 2019
2
August, 2018
2
May, 2024
2
September, 2018
1
August, 2020
1
August, 2022
1
January, 2018
Available data
5405
bed bed3+
793
tsv
453
bigWig
108
txt
18
csv
2
bigBed narrowPeak
Organism
6330
Homo sapiens
Biosample type
2076
cell line
2064
primary cell
1816
tissue
417
in vitro differentiated cells
3
stem cell
Organ
896
epithelium
575
kidney
412
connective tissue
394
brain
301
musculature of body
pancreas
240
lung
233
vasculature
intestine
204
heart
194
limb
191
bodily fluid
187
embryo
182
blood
176
blood vessel
169
skin of body
liver
138
large intestine
113
extraembryonic component
100
eye
95
stomach
79
adipose tissue
79
uterus
74
bone element
72
mammary gland
67
artery
65
prostate gland
64
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5733
AMP
291
ENCODE
281
KPMP
40
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
5520
hg19
884
GRCh38
2
hg18
organ_slims!
liver
intestine
pancreas
annotation_type!
chromatin state
BIOSAMPLE
TYPE
6378 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
MCF-7
9
6
2
1
3
+ See 748 more…
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 417 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 227 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 118 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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