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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
961
histone modifications
854
accessible chromatin
828
candidate regulatory elements
804
binding sites
658
gene expression
488
target gene predictions
163
differential activity
163
eQTL
136
variant allelic effects
108
chromatin state
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2562
February, 2021
September, 2022
386
May, 2021
349
February, 2024
328
November, 2021
286
September, 2023
283
June, 2020
152
May, 2020
118
August, 2021
118
March, 2020
105
January, 2022
100
October, 2022
86
January, 2020
66
March, 2023
62
February, 2020
January, 2021
47
May, 2022
44
November, 2022
32
August, 2017
32
February, 2023
29
March, 2024
19
April, 2020
14
October, 2019
13
November, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
2
January, 2018
2
May, 2024
2
September, 2018
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4117
bed bed3+
871
tsv
491
bigWig
108
txt
39
bigBed bed9
36
bed bed9
34
bed bed9+
21
csv
15
bigBed narrowPeak
Organism
5222
Homo sapiens
Biosample type
1871
primary cell
1795
cell line
1237
tissue
361
in vitro differentiated cells
4
stem cell
Organ
778
epithelium
427
kidney
338
connective tissue
286
brain
213
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
extraembryonic component
45
bone element
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bronchus
9
lymphoid tissue
9
skeleton
8
bone marrow
7
breast
7
mouth
5
trachea
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4622
AMP
328
ENCODE
281
KPMP
19
LungMap
11
community
5
ITG
4
T1D
Genome assembly (visualization)
4316
hg19
990
GRCh38
2
hg18
organ_slims!
liver
tongue
month_released!
January, 2021
September, 2022
BIOSAMPLE
TYPE
5270 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
17
1
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
3
7
3
4
1
endothelial cell
1
14
2
9
6
1
2
2
fibroblast
16
1
4
2
6
macrophage
11
2
2
7
3
1
+ See 433 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
+ See 743 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 254 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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