Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1622
candidate regulatory elements
1267
target gene predictions
960
histone modifications
915
chromatin state
881
accessible chromatin
797
binding sites
655
gene expression
163
differential activity
159
eQTL
136
variant allelic effects
71
Fine-mapped variants
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
830
February, 2021
114
May, 2021
14
August, 2021
2
September, 2022
Available data
959
bed bed3+
Organism
960
Homo sapiens
Biosample type
577
cell line
204
primary cell
94
in vitro differentiated cells
85
tissue
Organ
48
brain
28
epithelium
25
bodily fluid
25
connective tissue
24
blood
liver
13
skin of body
11
embryo
8
intestine
8
vasculature
7
musculature of body
7
prostate gland
6
blood vessel
6
bone element
6
heart
6
kidney
6
pancreas
5
artery
5
extraembryonic component
5
large intestine
5
mammary gland
5
penis
4
eye
4
lung
4
lymph node
3
placenta
2
bone marrow
2
limb
2
trachea
uterus
1
adipose tissue
1
bronchus
gonad
1
lymphatic vessel
1
lymphoid tissue
1
pituitary gland
1
stomach
1
testis
1
thymus
1
vein
Project
960
AMP
Genome assembly (visualization)
959
hg19
98
GRCh38
organ_slims!
liver
uterus
gonad
BIOSAMPLE
TYPE
960 results
search-icon
table-tab-icon
Clear Filters
histone modifications
cell line
breast cancer cell
11
gastric cancer cell
9
Rhabdomyosarcoma
8
neuroblastoma cell
8
B-lymphoblastoid cell line
6
+ See 466 more…
primary cell
monocyte
86
CD8-positive, alpha-beta T cell
30
mammary epithelial cell
3
acute myeloid leukemia cell
2
foreskin fibroblast
2
+ See 74 more…
in vitro differentiated cells
neural progenitor cell
15
neuroblastoma cell line
6
T-cell acute lymphoblastic leukemia
5
rhabdomyosarcoma cell
4
pancreatic ductal adenocarcinoma
3
+ See 55 more…
tissue
brain
3
kidney
2
placenta
2
prostate gland
2
Brodmann (1909) area 9
1
+ See 75 more…
See all biosamples
Download