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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
gene expression
115
target gene predictions
97
candidate regulatory elements
89
differential activity
51
chromatin state
47
accessible chromatin
36
binding sites
34
variant allelic effects
24
histone modifications
3
eQTL
2
caQTL
Date released
187
February, 2021
155
September, 2023
142
September, 2022
48
November, 2021
34
March, 2023
33
May, 2021
29
February, 2024
24
June, 2020
12
August, 2021
12
May, 2020
10
January, 2021
9
February, 2020
8
November, 2022
6
August, 2018
6
October, 2022
5
February, 2023
3
August, 2017
2
January, 2020
2
March, 2020
2
March, 2024
1
May, 2022
Available data
512
bed bed3+
304
tsv
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
730
Homo sapiens
Biosample type
632
primary cell
41
cell line
40
tissue
17
in vitro differentiated cells
Organ
773
epithelium
616
kidney
445
brain
405
connective tissue
359
musculature of body
302
lung
278
intestine
235
vasculature
233
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
181
blood vessel
171
large intestine
143
extraembryonic component
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
uterus
79
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
515
AMP
155
KPMP
48
ENCODE
10
T1D
2
community
Genome assembly (visualization)
405
hg19
99
GRCh38
organ_slims!
liver
uterus
files.file_type!
bigWig
BIOSAMPLE
TYPE
730 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
1
2
1
1
1
endothelial cell of umbilical vein
4
6
5
1
2
1
foreskin keratinocyte
4
11
4
+ See 129 more…
cell line
EndoC_BH1
8
1
3
7
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
tissue
breast epithelium
3
5
2
1
esophagus squamous epithelium
2
6
2
1
pigmented layer of retina
7
kidney epithelium
1
1
breast - mammary tissue
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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