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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
197
accessible chromatin
118
target gene predictions
97
candidate regulatory elements
51
chromatin state
36
binding sites
35
variant allelic effects
24
histone modifications
3
eQTL
1
caQTL
1
gene expression
Date released
145
September, 2022
123
November, 2021
108
February, 2021
45
February, 2024
23
June, 2020
20
January, 2021
16
May, 2021
15
November, 2022
13
January, 2020
10
February, 2023
10
May, 2020
8
August, 2021
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
511
bed bed3+
158
bigWig
48
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
563
Homo sapiens
Biosample type
458
primary cell
59
tissue
32
cell line
14
in vitro differentiated cells
Organ
600
epithelium
423
brain
387
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
205
embryo
204
vasculature
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
413
AMP
123
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
563
hg19
200
GRCh38
organ_slims!
liver
BIOSAMPLE
TYPE
563 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
gene expression
primary cell
endothelial cell
15
7
2
2
1
1
1
1
endothelial cell of umbilical vein
2
4
6
5
2
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
mammary gland epithelial cell
1
4
3
3
1
1
+ See 91 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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