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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1470
candidate regulatory elements
1230
target gene predictions
967
histone modifications
872
accessible chromatin
803
binding sites
661
gene expression
167
differential activity
162
eQTL
129
variant allelic effects
69
chromatin state
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2472
February, 2021
1466
September, 2022
376
May, 2021
372
February, 2024
314
November, 2021
286
September, 2023
278
June, 2020
142
May, 2020
120
August, 2021
112
March, 2020
102
January, 2022
97
October, 2022
72
January, 2020
70
March, 2023
56
January, 2021
53
February, 2020
49
May, 2022
44
November, 2022
34
August, 2017
29
February, 2023
29
March, 2024
16
April, 2020
10
November, 2019
9
August, 2018
8
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5511
bed bed3+
868
tsv
bed bed9
515
bigWig
108
txt
34
bed bed9+
30
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6582
Homo sapiens
Biosample type
2247
primary cell
2091
cell line
1857
tissue
429
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
lung
234
intestine
234
vasculature
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5945
AMP
314
ENCODE
281
KPMP
60
T1D
16
LungMap
9
community
5
ITG
Genome assembly (visualization)
5673
hg19
950
GRCh38
4
hg18
organ_slims!
lung
heart
files.file_type!
bed bed9
BIOSAMPLE
TYPE
6630 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 433 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 755 more…
tissue
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
muscle of arm
33
16
1
1
adrenal gland
28
17
1
1
1
+ See 243 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 120 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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