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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1517
candidate regulatory elements
1258
target gene predictions
959
histone modifications
874
accessible chromatin
795
binding sites
658
gene expression
163
differential activity
160
eQTL
135
variant allelic effects
71
Fine-mapped variants
71
chromatin state
12
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2494
February, 2021
1506
September, 2022
377
May, 2021
348
February, 2024
319
November, 2021
286
September, 2023
278
June, 2020
149
May, 2020
118
August, 2021
117
March, 2020
104
January, 2022
96
October, 2022
80
January, 2020
66
March, 2023
62
February, 2020
56
January, 2021
47
May, 2022
44
November, 2022
32
February, 2023
31
August, 2017
29
March, 2024
16
April, 2020
12
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
2
January, 2018
2
September, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5583
bed bed3+
869
tsv
bed bed9
514
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
21
csv
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
6649
Homo sapiens
Biosample type
2214
primary cell
2075
cell line
1978
tissue
424
in vitro differentiated cells
4
stem cell
Organ
899
epithelium
575
kidney
417
connective tissue
400
brain
304
musculature of body
264
pancreas
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6007
AMP
319
ENCODE
281
KPMP
60
T1D
16
LungMap
9
community
5
ITG
Genome assembly (visualization)
5746
hg19
951
GRCh38
2
hg18
organ_slims!
lung
liver
files.file_type!
bed bed9
BIOSAMPLE
TYPE
6697 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 438 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 753 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
muscle of arm
33
16
1
1
+ See 255 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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