Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
65
target gene predictions
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
110
September, 2022
13
February, 2021
10
June, 2020
6
May, 2021
5
February, 2024
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
96
bed bed3+
55
bed bed9
3
tsv
Organism
157
Homo sapiens
Biosample type
129
tissue
24
cell line
4
primary cell
Organ
722
epithelium
490
kidney
355
brain
330
connective tissue
235
pancreas
218
musculature of body
210
vasculature
175
heart
171
bodily fluid
171
lung
164
blood
162
blood vessel
157
intestine
156
embryo
150
limb
128
liver
119
skin of body
99
large intestine
87
eye
84
extraembryonic component
72
uterus
70
adipose tissue
65
artery
63
bone element
59
stomach
53
mammary gland
51
prostate gland
43
small intestine
42
placenta
lymph node
36
penis
35
adrenal gland
33
ureter
31
gonad
28
thymus
27
spinal cord
24
esophagus
19
nerve
19
spleen
17
testis
17
vein
15
lymphoid tissue
14
lymphatic vessel
14
skeleton
13
ovary
13
pituitary gland
13
thyroid gland
11
mouth
10
bone marrow
10
bronchus
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
157
AMP
ENCODE
Genome assembly (visualization)
151
hg19
60
GRCh38
organ_slims!
lymph node
annotation_type!
candidate regulatory elements
award.project!
ENCODE
BIOSAMPLE
TYPE
157 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
17
15
1
1
large intestine
14
13
1
1
sigmoid colon
7
5
1
transverse colon
5
4
1
1
Peyer's patch
3
3
1
+ See 14 more…
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
See all biosamples
Download