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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
16
target gene predictions
15
accessible chromatin
candidate regulatory elements
5
binding sites
4
chromatin state
4
histone modifications
3
variant allelic effects
Date released
19
November, 2021
8
February, 2021
8
September, 2022
5
February, 2024
4
June, 2020
2
May, 2021
1
October, 2022
Available data
43
bed bed3+
11
bigWig
4
bed bed9
Organism
47
Homo sapiens
Biosample type
tissue
24
cell line
23
primary cell
Organ
799
epithelium
321
kidney
304
connective tissue
167
bodily fluid
161
blood
159
pancreas
150
vasculature
136
embryo
114
skin of body
99
blood vessel
90
liver
87
brain
87
lung
64
uterus
58
musculature of body
57
mammary gland
47
intestine
46
bone element
lymph node
40
prostate gland
35
heart
34
penis
32
extraembryonic component
31
eye
30
large intestine
29
artery
17
lymphatic vessel
16
vein
12
bronchus
11
adrenal gland
11
bone marrow
11
stomach
10
pituitary gland
10
placenta
9
gonad
8
esophagus
6
limb
6
testis
5
adipose tissue
5
lymphoid tissue
5
spinal cord
5
trachea
4
mouth
4
small intestine
3
nose
3
thyroid gland
2
ovary
1
pericardium
1
thymus
Project
28
AMP
19
ENCODE
Genome assembly (visualization)
47
hg19
25
GRCh38
organ_slims!
lymph node
annotation_type!
candidate regulatory elements
biosample_type!
tissue
BIOSAMPLE
TYPE
47 results
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Clear Filters
target gene predictions
accessible chromatin
binding sites
chromatin state
histone modifications
variant allelic effects
cell line
HT-29
2
1
1
1
1
SW480
1
1
1
1
1
HCT-116 cell
1
1
2
HCT116
3
1
RKO
1
1
1
+ See 1 more…
primary cell
colon epithelial cell
3
3
enterocyte
3
3
enteric smooth muscle cell
2
2
enterocyte of epithelium of small intestine
1
1
paneth cell
1
1
+ See 2 more…
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