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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
233
gene expression
202
accessible chromatin
130
target gene predictions
120
candidate regulatory elements
89
differential activity
62
chromatin state
43
binding sites
38
variant allelic effects
30
histone modifications
4
eQTL
2
caQTL
Date released
215
February, 2021
178
September, 2022
155
September, 2023
123
November, 2021
48
February, 2024
34
March, 2023
34
May, 2021
28
June, 2020
20
August, 2021
20
January, 2021
15
November, 2022
13
January, 2020
13
May, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
3
March, 2024
2
March, 2020
2
May, 2022
1
January, 2022
1
November, 2019
Available data
564
bed bed3+
305
tsv
158
bigWig
78
txt
59
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
953
Homo sapiens
Biosample type
765
primary cell
93
cell line
76
tissue
19
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
646
AMP
155
KPMP
123
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
626
hg19
212
GRCh38
organ_slims!
lymph node
liver
BIOSAMPLE
TYPE
953 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
foreskin keratinocyte
4
11
4
+ See 143 more…
cell line
EndoC_BH1
8
8
1
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 15 more…
tissue
pigmented layer of retina
20
prostate gland
1
2
4
2
2
2
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
+ See 2 more…
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