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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1667
candidate regulatory elements
1354
target gene predictions
976
histone modifications
942
chromatin state
909
accessible chromatin
815
binding sites
680
gene expression
169
eQTL
165
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
288
June, 2020
220
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
30
February, 2023
28
January, 2021
26
May, 2021
18
April, 2020
15
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
7
October, 2022
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
912
bed bed3+
525
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
877
Homo sapiens
Biosample type
492
primary cell
199
tissue
163
cell line
68
in vitro differentiated cells
Organ
214
epithelium
90
connective tissue
65
pancreas
59
eye
50
kidney
42
brain
39
vasculature
29
blood vessel
29
musculature of body
28
heart
25
liver
21
intestine
20
limb
15
bone element
15
lung
13
artery
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
653
AMP
220
ENCODE
31
T1D
18
LungMap
Genome assembly (visualization)
907
hg19
397
GRCh38
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
922 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
18
endothelial cell
15
2
fibroblast
16
macrophage
12
1
excitatory neuron
12
+ See 218 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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