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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1667
candidate regulatory elements
1216
target gene predictions
976
histone modifications
942
chromatin state
815
binding sites
642
accessible chromatin
512
gene expression
166
eQTL
139
variant allelic effects
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
288
June, 2020
65
January, 2020
54
May, 2020
48
February, 2024
44
November, 2022
30
August, 2021
30
February, 2023
26
May, 2021
15
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
5
October, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
643
bed bed3+
259
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
608
Homo sapiens
Biosample type
223
primary cell
199
tissue
163
cell line
68
in vitro differentiated cells
Organ
119
epithelium
55
eye
54
connective tissue
47
kidney
44
pancreas
42
brain
31
vasculature
24
blood vessel
22
heart
21
liver
21
musculature of body
20
limb
13
artery
13
bone element
12
blood
12
bodily fluid
10
embryo
10
intestine
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
6
lung
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
esophagus
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
breast
1
bronchus
lymphatic vessel
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Project
653
AMP
220
ENCODE
31
T1D
18
LungMap
Genome assembly (visualization)
640
hg19
174
GRCh38
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
653 results
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Clear Filters
accessible chromatin
caQTL
primary cell
monocyte
17
hepatocyte
7
endothelial cell
4
2
osteoblast
5
endothelial cell of hepatic sinusoid
4
+ See 122 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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