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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
candidate regulatory elements
116
accessible chromatin
104
target gene predictions
82
gene expression
77
chromatin state
47
binding sites
31
histone modifications
30
differential activity
29
variant allelic effects
27
eQTL
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
183
September, 2022
149
February, 2021
53
November, 2021
47
September, 2023
35
February, 2024
24
June, 2020
23
January, 2020
23
May, 2020
21
March, 2020
19
May, 2021
14
February, 2020
14
October, 2022
12
August, 2021
11
March, 2023
9
January, 2022
8
August, 2017
7
November, 2022
5
April, 2020
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
462
bed bed3+
124
tsv
80
bigWig
69
bed bed9
10
bigBed bed9
9
txt
1
bigBed narrowPeak
Organism
686
Homo sapiens
Biosample type
416
primary cell
179
tissue
50
in vitro differentiated cells
40
cell line
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
575
AMP
53
ENCODE
45
KPMP
5
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
557
hg19
198
GRCh38
2
hg18
organ_slims!
lymphatic vessel
small intestine
BIOSAMPLE
TYPE
686 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
gene expression
chromatin state
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
2
4
5
2
1
osteoblast
2
5
2
2
1
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 68 more…
tissue
adipose tissue
7
2
8
3
6
1
1
4
coronary artery
3
3
3
1
3
2
2
3
1
subcutaneous adipose tissue
2
2
5
1
1
1
6
3
tibial artery
3
3
2
1
3
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 15 more…
in vitro differentiated cells
adipocyte
4
4
6
1
6
1
1
mesenchymal stem cell
3
1
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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