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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1603
candidate regulatory elements
1315
target gene predictions
971
histone modifications
906
chromatin state
902
accessible chromatin
814
binding sites
682
gene expression
170
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
845
February, 2021
281
June, 2020
219
November, 2021
140
May, 2021
65
January, 2020
54
May, 2020
49
February, 2024
47
August, 2021
44
November, 2022
28
January, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
12
September, 2022
9
October, 2019
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
1862
bed bed3+
525
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1828
Homo sapiens
Biosample type
745
cell line
686
primary cell
279
tissue
163
in vitro differentiated cells
Organ
240
epithelium
113
connective tissue
90
brain
71
pancreas
63
eye
56
kidney
44
vasculature
38
liver
37
bodily fluid
36
blood
34
musculature of body
32
blood vessel
32
heart
29
intestine
26
skin of body
23
embryo
22
limb
21
bone element
19
lung
16
artery
15
large intestine
extraembryonic component
12
lymph node
12
mammary gland
12
prostate gland
9
stomach
8
adipose tissue
8
penis
8
skeleton
7
adrenal gland
7
placenta
6
gonad
5
lymphatic vessel
5
uterus
4
bone marrow
4
bronchus
4
esophagus
4
ureter
lymphoid tissue
3
nerve
3
small intestine
3
testis
3
thymus
3
trachea
3
vein
2
ovary
2
spinal cord
2
spleen
2
thyroid gland
1
breast
1
mouth
1
nose
1
pituitary gland
1
tongue
1
urinary bladder
Project
1606
AMP
219
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1864
hg19
494
GRCh38
organ_slims!
lymphoid tissue
extraembryonic component
BIOSAMPLE
TYPE
1873 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
cell line
breast cancer cell
11
EndoC_BH1
1
8
Rhabdomyosarcoma
8
1
gastric cancer cell
9
neuroblastoma cell
8
+ See 517 more…
primary cell
monocyte
86
18
CD8-positive, alpha-beta T cell
30
4
endothelial cell
1
15
fibroblast
16
excitatory neuron
12
+ See 254 more…
tissue
retina
1
23
pigmented layer of retina
20
kidney
2
10
islet of Langerhans
1
6
heart
1
5
+ See 149 more…
in vitro differentiated cells
neural progenitor cell
15
10
embryonic stem cell
1
6
neuroblastoma cell line
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
+ See 75 more…
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