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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
target gene predictions
candidate regulatory elements
17
chromatin state
12
binding sites
9
histone modifications
8
accessible chromatin
3
gene expression
2
eQTL
1
variant allelic effects
Date released
52
February, 2024
34
September, 2022
20
February, 2021
7
June, 2020
4
May, 2021
3
March, 2024
2
January, 2022
2
November, 2021
1
October, 2022
Available data
103
bed bed3+
17
bed bed9
3
tsv
1
bigWig
Organism
125
Homo sapiens
Biosample type
93
cell line
21
tissue
11
primary cell
Organ
849
epithelium
493
kidney
380
connective tissue
355
brain
253
pancreas
229
musculature of body
216
vasculature
185
heart
180
lung
176
intestine
171
bodily fluid
165
blood vessel
164
blood
158
embryo
150
limb
133
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
70
adipose tissue
68
stomach
65
artery
64
bone element
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
27
spinal cord
19
nerve
19
spleen
17
lymphatic vessel
17
testis
17
vein
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
123
AMP
2
ENCODE
Genome assembly (visualization)
120
hg19
72
GRCh38
organ_slims!
lymphoid tissue
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
125 results
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Clear Filters
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
variant allelic effects
cell line
HeLa-S3
55
3
1
22Rv1
2
2
1
1
PC-3
1
1
1
1
1
RWPE1
1
1
1
1
1
LNCAP
1
1
1
1
+ See 5 more…
tissue
prostate gland
2
2
2
2
1
1
uterus
2
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
+ See 1 more…
primary cell
epithelial cell of prostate
3
2
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
luminal epithelial cell of prostatic duct
1
See all biosamples
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