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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
128
candidate regulatory elements
86
target gene predictions
79
chromatin state
48
histone modifications
46
accessible chromatin
36
Fine-mapped variants
32
eQTL
21
gene expression
19
variant allelic effects
16
binding sites
Date released
201
September, 2022
120
February, 2021
39
March, 2020
29
January, 2020
23
June, 2020
21
January, 2022
19
May, 2020
18
February, 2020
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
4
November, 2021
3
February, 2024
3
March, 2024
3
September, 2023
1
November, 2019
Available data
342
bed bed3+
73
bed bed9
69
tsv
23
bigWig
6
bigBed bed9
Organism
510
Homo sapiens
Biosample type
384
tissue
77
cell line
45
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
vagina
5
trachea
4
nose
1
pericardium
Project
507
AMP
4
ENCODE
Genome assembly (visualization)
463
hg19
166
GRCh38
organ_slims!
mouth
vagina
BIOSAMPLE
TYPE
511 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
variant allelic effects
binding sites
tissue
brain
29
16
18
3
2
2
1
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 62 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
epithelial cell of esophagus
2
1
1
2
cardiac fibroblast
3
2
+ See 6 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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