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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1414
candidate regulatory elements
1201
target gene predictions
922
histone modifications
844
accessible chromatin
798
chromatin state
794
binding sites
653
gene expression
166
differential activity
135
eQTL
116
variant allelic effects
32
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
262
June, 2020
214
November, 2021
52
May, 2020
44
February, 2024
44
November, 2022
42
January, 2020
30
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
12
November, 2019
11
February, 2021
11
May, 2022
9
October, 2019
6
September, 2022
3
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
834
bed bed3+
491
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
799
Homo sapiens
Biosample type
458
primary cell
166
tissue
152
cell line
68
in vitro differentiated cells
Organ
212
epithelium
88
connective tissue
65
pancreas
59
eye
50
kidney
brain
36
vasculature
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
582
AMP
214
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
836
hg19
358
GRCh38
organ_slims!
musculature of body
brain
BIOSAMPLE
TYPE
844 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 205 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 74 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 137 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
See all biosamples
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