Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
859
histone modifications
734
binding sites
712
target gene predictions
634
candidate regulatory elements
517
accessible chromatin
378
chromatin state
316
gene expression
70
differential activity
53
eQTL
48
variant allelic effects
7
caQTL
5
hQTL
3
meQTL
3
sQTL
2
other
1
representative DNase hypersensitivity sites
Date released
203
June, 2020
136
November, 2021
46
May, 2020
21
November, 2022
18
January, 2021
18
May, 2021
15
August, 2021
14
February, 2024
12
April, 2020
12
January, 2020
8
May, 2022
4
January, 2022
3
February, 2021
2
November, 2019
2
November, 2020
2
October, 2019
1
June, 2021
Available data
510
bed bed3+
259
bigWig
2
bigBed narrowPeak
Organism
472
Homo sapiens
Biosample type
308
primary cell
tissue
149
cell line
60
in vitro differentiated cells
Organ
epithelium
80
connective tissue
45
pancreas
29
kidney
28
vasculature
20
liver
19
brain
musculature of body
18
blood vessel
15
eye
15
intestine
13
lung
13
skin of body
12
blood
12
bodily fluid
10
embryo
9
heart
8
lymph node
7
bone element
7
large intestine
7
mammary gland
6
adrenal gland
6
extraembryonic component
5
artery
5
stomach
4
lymphatic vessel
4
prostate gland
3
bronchus
3
gonad
3
penis
3
placenta
2
bone marrow
2
esophagus
2
small intestine
2
uterus
2
vein
1
adipose tissue
1
limb
1
lymphoid tissue
1
nose
1
ovary
1
spinal cord
1
testis
1
thymus
1
thyroid gland
1
trachea
Project
350
AMP
136
ENCODE
19
T1D
12
LungMap
Genome assembly (visualization)
510
hg19
187
GRCh38
organ_slims!
musculature of body
epithelium
biosample_type!
tissue
BIOSAMPLE
TYPE
517 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
excitatory neuron
12
macrophage
12
pericyte cell
10
+ See 135 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 141 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 26 more…
See all biosamples
Download