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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1525
candidate regulatory elements
1277
target gene predictions
970
histone modifications
886
accessible chromatin
870
chromatin state
810
binding sites
672
gene expression
166
differential activity
162
eQTL
133
variant allelic effects
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
723
February, 2021
283
June, 2020
214
November, 2021
90
October, 2022
60
January, 2020
54
May, 2020
50
February, 2024
44
November, 2022
31
August, 2021
28
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
12
November, 2019
11
May, 2022
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1686
bed bed3+
512
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1651
Homo sapiens
Biosample type
803
cell line
562
primary cell
224
tissue
107
in vitro differentiated cells
Organ
255
epithelium
119
connective tissue
70
pancreas
65
eye
58
bodily fluid
58
brain
57
blood
57
kidney
57
vasculature
42
blood vessel
37
liver
musculature of body
31
heart
31
skin of body
27
intestine
25
embryo
24
lung
23
bone element
22
limb
20
lymph node
19
mammary gland
17
artery
16
large intestine
13
prostate gland
12
extraembryonic component
10
penis
9
adipose tissue
8
gonad
8
skeleton
8
stomach
7
adrenal gland
7
placenta
7
uterus
6
lymphatic vessel
5
bronchus
5
testis
5
vein
4
bone marrow
4
esophagus
4
spinal cord
4
ureter
3
nerve
3
small intestine
3
spleen
3
thymus
3
trachea
2
lymphoid tissue
2
ovary
2
thyroid gland
1
breast
1
mouth
1
nose
1
tongue
1
urinary bladder
Project
1434
AMP
214
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
1687
hg19
385
GRCh38
1
hg18
organ_slims!
musculature of body
BIOSAMPLE
TYPE
1696 results
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table-tab-icon
Clear Filters
accessible chromatin
binding sites
cell line
EndoC_BH1
8
1
breast cancer cell
9
fibroblast cell line
1
6
melanoma
7
HepG2
2
3
+ See 539 more…
primary cell
monocyte
18
1
endothelial cell
15
2
fibroblast
16
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
+ See 237 more…
tissue
retina
23
1
pigmented layer of retina
20
kidney
10
1
islet of Langerhans
6
2
heart
5
1
+ See 103 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
1
retinal pigment epithelial cell
6
SGBS preadipocytes
5
adipocyte
4
1
+ See 51 more…
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