Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1123
candidate regulatory elements
846
target gene predictions
677
binding sites
669
histone modifications
632
chromatin state
350
accessible chromatin
126
gene expression
120
eQTL
68
Fine-mapped variants
49
variant allelic effects
14
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1863
February, 2021
1721
September, 2022
209
June, 2020
193
February, 2024
104
March, 2020
89
May, 2021
70
October, 2022
65
January, 2022
59
January, 2020
58
May, 2020
54
August, 2021
43
February, 2020
28
February, 2023
27
March, 2024
22
August, 2017
17
November, 2022
15
March, 2023
12
November, 2019
9
May, 2022
8
April, 2019
7
May, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
3743
bed bed3+
597
bed bed9
220
tsv
120
bigWig
29
bigBed bed9
7
bed bed9+
1
bam
Organism
4684
Homo sapiens
Biosample type
primary cell
2346
tissue
2335
cell line
in vitro differentiated cells
4
stem cell
Organ
427
brain
342
kidney
musculature of body
277
lung
266
intestine
243
limb
223
heart
209
bodily fluid
198
blood
168
large intestine
163
embryo
148
pancreas
127
connective tissue
108
stomach
104
epithelium
101
extraembryonic component
95
skin of body
95
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
64
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4672
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
4458
hg19
1018
GRCh38
4
hg18
organ_slims!
musculature of body
biosample_type!
primary cell
in vitro differentiated cells
BIOSAMPLE
TYPE
4687 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
tissue
heart
37
20
1
1
21
5
3
2
stomach
40
21
1
19
3
1
1
kidney
29
14
1
2
16
10
7
1
1
brain
29
16
1
3
18
2
1
2
1
lung
33
17
16
1
1
+ See 238 more…
cell line
HeLa-S3
5
55
1
3
A549
21
19
2
1
18
1
H1-hESC
1
39
2
1
1
1
8
K562
7
23
2
1
7
1
MCF-7
9
6
3
2
5
1
+ See 762 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download