Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
308
accessible chromatin
253
target gene predictions
238
candidate regulatory elements
237
gene expression
190
histone modifications
147
chromatin state
65
binding sites
63
differential activity
41
eQTL
39
variant allelic effects
7
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
348
September, 2022
283
February, 2021
240
May, 2021
195
November, 2021
126
September, 2023
78
February, 2024
72
May, 2020
38
June, 2020
37
January, 2022
36
January, 2021
35
May, 2022
22
October, 2022
19
August, 2021
19
March, 2023
12
April, 2020
9
January, 2020
9
November, 2022
7
February, 2020
3
August, 2017
3
August, 2018
3
February, 2023
3
November, 2020
1
June, 2021
1
March, 2024
1
October, 2019
Available data
1109
bed bed3+
284
tsv
247
bigWig
117
bed bed9
30
txt
27
bed bed9+
2
bigBed narrowPeak
1
bigBed bed9
Organism
1555
Homo sapiens
Biosample type
2292
cell line
2285
tissue
1600
primary cell
442
in vitro differentiated cells
4
stem cell
Organ
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1228
AMP
195
ENCODE
126
KPMP
39
T1D
12
LungMap
Genome assembly (visualization)
1263
hg19
474
GRCh38
organ_slims!
musculature of body
epithelium
BIOSAMPLE
TYPE
1600 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
histone modifications
chromatin state
binding sites
differential activity
eQTL
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
3
30
1
B cell
6
10
14
2
8
CD4-positive, alpha-beta memory T cell
9
14
9
+ See 289 more…
See all biosamples
Download