Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
472
gene expression
460
accessible chromatin
341
target gene predictions
286
candidate regulatory elements
203
histone modifications
176
chromatin state
152
differential activity
89
binding sites
77
variant allelic effects
42
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
430
September, 2022
419
February, 2021
312
November, 2021
281
September, 2023
252
May, 2021
137
February, 2024
85
May, 2020
56
January, 2021
55
March, 2023
51
June, 2020
42
August, 2021
37
January, 2022
37
May, 2022
25
October, 2022
22
January, 2020
19
April, 2020
15
February, 2020
9
August, 2018
9
November, 2022
6
October, 2019
5
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1471
bed bed3+
589
tsv
393
bigWig
144
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
2274
Homo sapiens
Biosample type
2321
tissue
2319
primary cell
2265
cell line
459
in vitro differentiated cells
4
stem cell
Organ
819
epithelium
309
kidney
281
connective tissue
169
vasculature
126
pancreas
114
blood vessel
skin of body
63
liver
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1648
AMP
312
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1654
hg19
665
GRCh38
organ_slims!
musculature of body
skin of body
BIOSAMPLE
TYPE
2319 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
15
18
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
3
4
5
7
30
1
B cell
2
6
10
14
8
endothelial cell
9
15
7
1
2
2
1
2
+ See 426 more…
See all biosamples
Download