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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
accessible chromatin
100
candidate regulatory elements
63
target gene predictions
53
chromatin state
43
binding sites
38
variant allelic effects
28
histone modifications
3
eQTL
1
caQTL
1
gene expression
Date released
151
September, 2022
111
February, 2021
61
February, 2024
24
June, 2020
17
May, 2021
15
November, 2022
14
January, 2020
12
May, 2020
11
August, 2021
10
February, 2023
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
February, 2020
1
November, 2019
Available data
392
bed bed3+
72
bigWig
50
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
446
Homo sapiens
Biosample type
337
primary cell
59
tissue
32
cell line
18
in vitro differentiated cells
Organ
446
epithelium
423
brain
384
kidney
356
musculature of body
328
connective tissue
297
lung
264
intestine
237
limb
219
heart
217
bodily fluid
206
blood
203
embryo
195
vasculature
189
skin of body
164
large intestine
154
blood vessel
148
pancreas
142
extraembryonic component
119
liver
107
stomach
103
eye
82
bone element
81
mammary gland
79
small intestine
78
uterus
76
prostate gland
70
placenta
69
adipose tissue
64
penis
64
ureter
62
lymph node
61
adrenal gland
60
artery
48
thymus
43
gonad
41
spinal cord
36
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
vein
19
ovary
19
thyroid gland
18
skeleton
17
mouth
13
bronchus
12
lymphatic vessel
11
breast
11
pituitary gland
10
bone marrow
9
tongue
9
urinary bladder
8
vagina
5
trachea
nose
Project
446
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
446
hg19
107
GRCh38
organ_slims!
nose
BIOSAMPLE
TYPE
446 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
gene expression
primary cell
endothelial cell of umbilical vein
2
6
4
5
2
foreskin keratinocyte
11
4
4
hepatocyte
7
1
2
1
1
2
4
keratinocyte
3
3
3
1
1
2
bronchial epithelial cell
1
4
2
2
2
1
+ See 63 more…
tissue
pigmented layer of retina
20
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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