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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
967
histone modifications
830
candidate regulatory elements
811
binding sites
581
accessible chromatin
511
gene expression
384
target gene predictions
165
eQTL
137
variant allelic effects
111
chromatin state
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2573
February, 2021
September, 2022
389
May, 2021
376
February, 2024
282
June, 2020
153
May, 2020
128
March, 2020
123
August, 2021
106
January, 2022
97
October, 2022
87
January, 2020
62
February, 2020
61
March, 2023
49
May, 2022
35
August, 2017
30
March, 2024
22
November, 2022
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
7
February, 2023
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3755
bed bed3+
615
tsv
241
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4605
Homo sapiens
Biosample type
1794
cell line
1280
primary cell
1215
tissue
358
in vitro differentiated cells
4
stem cell
Organ
487
epithelium
286
brain
284
kidney
264
connective tissue
193
pancreas
160
musculature of body
147
vasculature
143
bodily fluid
138
blood
137
heart
132
embryo
119
blood vessel
106
intestine
106
limb
105
liver
92
skin of body
89
lung
eye
70
large intestine
69
uterus
65
adipose tissue
49
artery
44
bone element
44
extraembryonic component
41
stomach
39
mammary gland
39
prostate gland
38
lymph node
34
penis
25
ureter
24
gonad
23
placenta
23
small intestine
21
adrenal gland
20
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
15
thymus
14
testis
13
pituitary gland
9
lymphoid tissue
9
ovary
9
skeleton
9
thyroid gland
7
bone marrow
7
breast
7
bronchus
7
mouth
6
lymphatic vessel
5
trachea
4
tongue
4
urinary bladder
4
vagina
nose
1
pericardium
Project
4652
AMP
329
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
3961
hg19
693
GRCh38
4
hg18
organ_slims!
nose
eye
month_released!
September, 2022
BIOSAMPLE
TYPE
4652 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
gene expression
target gene predictions
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
1
52
H1-hESC
1
2
1
8
38
K562
1
1
2
1
17
1
EndoC_BH1
1
1
8
8
1
1
1
breast cancer cell
11
9
+ See 743 more…
primary cell
monocyte
86
1
17
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
3
3
1
hepatocyte
4
1
7
13
1
2
endothelial cell
1
2
4
9
1
2
2
epithelial cell of proximal tubule
1
1
1
16
1
+ See 307 more…
tissue
islet of Langerhans
1
2
5
11
1
13
1
3
2
2
2
kidney
2
15
1
10
7
1
1
2
heart
1
18
1
5
3
1
2
2
stomach
1
21
3
1
2
1
liver
2
6
1
4
1
3
7
2
1
1
+ See 252 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
1
4
1
4
4
embryonic stem cell
1
1
6
1
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 117 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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