Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1655
candidate regulatory elements
1346
target gene predictions
977
histone modifications
936
chromatin state
910
accessible chromatin
817
binding sites
681
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
826
September, 2022
174
February, 2024
138
May, 2021
110
November, 2021
43
March, 2020
28
January, 2021
18
May, 2020
5
September, 2023
2
February, 2021
2
March, 2023
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
Available data
1348
bed bed3+
3
bigBed narrowPeak
3
bigWig
2
tsv
Organism
1350
Homo sapiens
Biosample type
514
tissue
398
cell line
370
primary cell
65
in vitro differentiated cells
3
stem cell
Organ
122
epithelium
84
embryo
80
musculature of body
78
connective tissue
78
lung
76
brain
75
kidney
73
intestine
58
uterus
57
bodily fluid
55
blood
49
heart
49
limb
46
pancreas
44
large intestine
44
skin of body
36
extraembryonic component
31
vasculature
30
stomach
25
blood vessel
23
small intestine
21
adrenal gland
21
liver
19
mammary gland
17
placenta
16
bone element
15
prostate gland
14
thymus
13
adipose tissue
13
ureter
11
gonad
11
penis
10
esophagus
10
pituitary gland
9
eye
9
lymph node
9
spinal cord
8
artery
8
spleen
ovary
6
lymphoid tissue
6
thyroid gland
mouth
4
testis
4
vein
3
bone marrow
3
breast
3
bronchus
3
lymphatic vessel
3
nerve
3
skeleton
3
urinary bladder
2
tongue
2
vagina
1
nose
Project
1212
AMP
110
ENCODE
28
T1D
Genome assembly (visualization)
1348
hg19
284
GRCh38
organ_slims!
ovary
mouth
BIOSAMPLE
TYPE
1350 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
variant to gene
tissue
stomach
21
heart
20
adrenal gland
17
lung
17
small intestine
17
+ See 110 more…
cell line
HeLa-S3
55
H1-hESC
39
K562
23
A549
19
HFFc6
19
+ See 164 more…
primary cell
CD14-positive monocyte
19
common myeloid progenitor, CD34-positive
14
B cell
10
pericyte cell
10
CD4-positive, alpha-beta memory T cell
9
+ See 167 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
dendritic cell
6
neural progenitor cell
5
cardiomyocytes (cardiac muscle cell)
3
+ See 27 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download