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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
914
target gene predictions
699
chromatin state
679
binding sites
673
histone modifications
359
accessible chromatin
130
gene expression
124
eQTL
74
Fine-mapped variants
53
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
Date released
1319
February, 2021
1274
September, 2022
214
June, 2020
193
February, 2024
112
March, 2020
93
May, 2021
70
October, 2022
65
January, 2022
63
January, 2020
62
May, 2020
55
August, 2021
48
February, 2020
28
February, 2023
28
March, 2024
25
August, 2017
17
November, 2022
15
March, 2023
12
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
September, 2023
Available data
2710
bed bed3+
661
bed bed9
233
tsv
124
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
3730
Homo sapiens
Biosample type
primary cell
2025
cell line
1702
tissue
in vitro differentiated cells
4
stem cell
Organ
325
brain
199
kidney
182
musculature of body
166
bodily fluid
159
blood
159
heart
155
lung
153
intestine
149
limb
126
embryo
124
pancreas
103
connective tissue
99
large intestine
92
epithelium
77
vasculature
72
blood vessel
69
uterus
68
adipose tissue
68
eye
67
liver
58
skin of body
57
extraembryonic component
57
stomach
52
bone element
45
prostate gland
43
small intestine
41
lymph node
40
artery
36
placenta
34
adrenal gland
33
ureter
29
gonad
28
thymus
25
spinal cord
23
mammary gland
20
esophagus
19
nerve
19
spleen
16
testis
15
lymphoid tissue
14
skeleton
ovary
13
pituitary gland
12
thyroid gland
10
penis
9
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
3
vein
2
lymphatic vessel
Project
3718
AMP
9
community
5
ITG
1
T1D
Genome assembly (visualization)
3499
hg19
1094
GRCh38
4
hg18
organ_slims!
ovary
biosample_type!
primary cell
in vitro differentiated cells
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
3733 results
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Clear Filters
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
other
sQTL
cell line
HeLa-S3
55
3
1
H1-hESC
39
1
2
1
1
8
A549
19
18
2
1
1
K562
23
7
2
1
1
EndoC_BH1
1
1
1
8
8
1
3
+ See 740 more…
tissue
heart
20
21
1
1
5
3
2
kidney
14
16
1
2
10
7
1
1
stomach
21
19
1
3
1
1
brain
16
18
1
3
2
1
2
1
islet of Langerhans
1
3
2
1
6
11
13
2
1
2
2
+ See 252 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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