Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
453
accessible chromatin
434
gene expression
359
target gene predictions
307
candidate regulatory elements
204
histone modifications
185
chromatin state
141
differential activity
86
binding sites
78
variant allelic effects
45
eQTL
9
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
457
September, 2022
436
February, 2021
328
November, 2021
261
September, 2023
254
May, 2021
138
February, 2024
82
May, 2020
56
January, 2021
51
March, 2023
50
June, 2020
August, 2021
40
May, 2022
37
January, 2022
29
October, 2022
19
January, 2020
17
April, 2020
14
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
5
August, 2017
4
March, 2020
3
November, 2020
2
February, 2023
2
May, 2024
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1506
bed bed3+
538
tsv
382
bigWig
153
bed bed9
83
txt
27
bed bed9+
16
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
2268
Homo sapiens
Biosample type
2502
tissue
2337
cell line
2313
primary cell
439
in vitro differentiated cells
4
stem cell
Organ
796
epithelium
289
kidney
282
connective tissue
169
vasculature
126
pancreas
blood vessel
100
skin of body
60
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1646
AMP
328
ENCODE
261
KPMP
59
T1D
17
LungMap
2
community
Genome assembly (visualization)
1704
hg19
668
GRCh38
organ_slims!
ovary
blood vessel
month_released!
August, 2021
BIOSAMPLE
TYPE
2313 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
2
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
14
6
7
1
2
2
1
2
+ See 408 more…
See all biosamples
Download