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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
967
histone modifications
887
accessible chromatin
831
candidate regulatory elements
811
binding sites
674
gene expression
518
target gene predictions
165
differential activity
165
eQTL
136
variant allelic effects
104
chromatin state
68
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2571
February, 2021
September, 2022
386
May, 2021
378
February, 2024
331
November, 2021
285
June, 2020
281
September, 2023
150
May, 2020
128
August, 2021
121
March, 2020
102
January, 2022
100
October, 2022
85
January, 2020
70
March, 2023
60
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
29
February, 2023
29
March, 2024
19
April, 2020
October, 2019
12
November, 2019
9
August, 2018
8
April, 2019
8
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4196
bed bed3+
883
tsv
525
bigWig
108
txt
34
bed bed9+
33
bigBed bed9
29
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5313
Homo sapiens
Biosample type
1955
primary cell
1806
cell line
1231
tissue
363
in vitro differentiated cells
4
stem cell
Organ
793
epithelium
427
kidney
338
connective tissue
286
brain
227
pancreas
189
vasculature
170
musculature of body
145
heart
143
bodily fluid
142
blood vessel
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4659
AMP
331
ENCODE
276
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4391
hg19
995
GRCh38
4
hg18
organ_slims!
ovary
artery
month_released!
September, 2022
October, 2019
BIOSAMPLE
TYPE
5361 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 434 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
+ See 745 more…
tissue
islet of Langerhans
1
5
2
11
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
1
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 252 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
3
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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