Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
642
binding sites
583
histone modifications
394
target gene predictions
candidate regulatory elements
188
chromatin state
155
accessible chromatin
13
gene expression
10
eQTL
7
differential activity
3
variant allelic effects
Date released
1154
February, 2021
357
September, 2022
168
February, 2024
152
June, 2020
70
October, 2022
47
May, 2021
10
January, 2022
9
August, 2021
7
March, 2023
7
May, 2022
6
March, 2020
5
August, 2017
1
January, 2020
1
March, 2024
1
May, 2020
Available data
1782
bed bed3+
176
bed bed9
13
tsv
7
bed bed9+
3
bigWig
Organism
1995
Homo sapiens
Biosample type
2015
primary cell
1995
cell line
1621
tissue
388
in vitro differentiated cells
4
stem cell
Organ
162
bodily fluid
156
blood
103
embryo
62
lung
59
uterus
56
brain
43
skin of body
42
epithelium
41
lymph node
34
bone element
34
prostate gland
pancreas
27
kidney
26
connective tissue
24
intestine
24
large intestine
24
liver
21
mammary gland
11
musculature of body
11
vasculature
10
pituitary gland
9
heart
8
eye
8
penis
6
blood vessel
5
gonad
5
limb
5
lymphoid tissue
5
testis
4
artery
3
adipose tissue
3
spinal cord
2
extraembryonic component
2
lymphatic vessel
2
mouth
2
placenta
2
vein
Project
1988
AMP
7
community
Genome assembly (visualization)
1964
hg19
361
GRCh38
1
hg18
organ_slims!
pancreas
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
1995 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
cell line
HeLa-S3
1
55
3
H1-hESC
2
1
39
1
1
8
A549
2
1
19
18
1
K562
2
1
23
7
1
breast cancer cell
9
11
+ See 735 more…
See all biosamples
Download